Displays a correlation matrix of the quantitative data of a numeric matrix.

omXplore_corrmatrix_ui(id)

omXplore_corrmatrix_server(
  id,
  obj = reactive({
     NULL
 }),
  i = reactive({
     NULL
 })
)

corrMatrix(data, rate = 0.5, showValues = FALSE)

omXplore_corrmatrix(obj, i)

Arguments

id: A character(1) which is the id of the shiny module.
obj: An instance of the class SummarizedExperiment
i: An integer which is the index of the assay in the param obj
data: An object of class 'matrix'
rate: The rate parameter to control the exponential law for the gradient of colors
showValues: A boolean which indicates whether to show values in the correlation plot.

Value

A plot

A shiny app

Examples

if (interactive()) {
  data(vdata)
  omXplore_corrmatrix(vdata, 1)
}